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About Developer

Khamisi Kibet

Khamisi Kibet

Software Developer

I am a computer scientist, software developer, and YouTuber, as well as the developer of this website, spinncode.com. I create content to help others learn and grow in the field of software development.

If you enjoy my work, please consider supporting me on platforms like Patreon or subscribing to my YouTube channel. I am also open to job opportunities and collaborations in software development. Let's build something amazing together!

  • Email

    infor@spinncode.com
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    Nairobi, Kenya
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7 Months ago | 50 views

**Course Title:** Mastering R Programming: Data Analysis, Visualization, and Beyond **Section Title:** Building Reports and Dashboards with RMarkdown and Shiny **Topic:** Deploying Shiny apps and RMarkdown documents. **Overview** In the previous topics, we explored how to build interactive dashboards using Shiny and create reproducible reports with RMarkdown. However, once you've built your application or document, you'll need to share it with others. In this topic, we'll cover the various ways to deploy Shiny apps and RMarkdown documents, making them accessible to a wider audience. **Deploying Shiny Apps** Shiny provides several options for deploying your apps, including: 1. **Shiny Server**: A free, open-source server that allows you to host your Shiny apps on your own server. You can download the Shiny Server from the RStudio website: <https://www.rstudio.com/products/shiny/shiny-server/> 2. **RStudio Connect**: A platform that allows you to host and manage your Shiny apps, as well as RMarkdown documents and other content. You can find more information on RStudio Connect here: <https://www.rstudio.com/products/connect/> 3. **Shiny Apps.io**: A cloud-based platform that allows you to deploy your Shiny apps with a single click. You can find more information on Shiny Apps.io here: <https://www.shinyapps.io/> 4. **Docker**: A containerization platform that allows you to package your Shiny app and its dependencies into a single container. You can find more information on Docker here: <https://www.docker.com/> To deploy your Shiny app, you'll need to follow these general steps: 1. **Create a new directory for your app**: This will contain your app's code, data, and any other dependencies. 2. **Create a `app.R` file**: This file will contain the code for your Shiny app. 3. **Create a `ui.R` file**: This file will contain the user interface code for your Shiny app. 4. **Create a `server.R` file**: This file will contain the server-side code for your Shiny app. 5. **Configure your deployment options**: Depending on the deployment method you choose, you'll need to configure the necessary options, such as setting up a Shiny Server or creating a Docker container. **Deploying RMarkdown Documents** RMarkdown documents can be deployed in various ways, including: 1. **RPubs**: A free, web-based platform that allows you to host and share your RMarkdown documents. You can find more information on RPubs here: <https://rpubs.com/> 2. **GitHub Pages**: A web-based platform that allows you to host and share your RMarkdown documents using GitHub. You can find more information on GitHub Pages here: <https://pages.github.com/> 3. **RStudio Connect**: A platform that allows you to host and manage your RMarkdown documents, as well as Shiny apps and other content. You can find more information on RStudio Connect here: <https://www.rstudio.com/products/connect/> To deploy your RMarkdown document, you'll need to follow these general steps: 1. **Create a new directory for your document**: This will contain your document's code and data. 2. **Create a new RMarkdown file**: This file will contain the code for your document. 3. **Knit your document**: Use the `knit` function in R to create a PDF or HTML version of your document. 4. **Configure your deployment options**: Depending on the deployment method you choose, you'll need to configure the necessary options, such as setting up an RPubs account or creating a GitHub Pages repository. **Best Practices for Deployment** When deploying your Shiny app or RMarkdown document, it's essential to follow best practices to ensure a smooth and reliable deployment process. Here are some tips to keep in mind: * **Test your app or document thoroughly**: Before deploying, test your app or document to ensure that it works as expected and that there are no issues. * **Use a version control system**: Use a version control system like Git to track changes to your app or document and to collaborate with others. * **Document your app or document**: Document your app or document to make it easier for others to understand how to use it. * **Monitor your app or document**: Monitor your app or document to ensure that it is working correctly and to identify any issues that may arise. **Conclusion** Deploying Shiny apps and RMarkdown documents is an essential step in sharing your work with others. By following the steps outlined in this topic, you can deploy your apps and documents in a variety of ways, including using Shiny Server, RStudio Connect, Shiny Apps.io, Docker, RPubs, GitHub Pages, and RStudio Connect. Remember to follow best practices for deployment, such as testing your app or document thoroughly, using a version control system, documenting your app or document, and monitoring your app or document. **What's Next?** In the next topic, we'll explore the `caret` and `mlr3` packages and learn how to implement machine learning algorithms in R. We'll cover topics such as data preparation, model selection, and model evaluation. **Practice Exercise** Deploy your own Shiny app or RMarkdown document using one of the methods outlined in this topic. Share your deployment experience and any challenges you faced in the comments section below.
Course

Deploying Shiny Apps and RMarkdown Documents

**Course Title:** Mastering R Programming: Data Analysis, Visualization, and Beyond **Section Title:** Building Reports and Dashboards with RMarkdown and Shiny **Topic:** Deploying Shiny apps and RMarkdown documents. **Overview** In the previous topics, we explored how to build interactive dashboards using Shiny and create reproducible reports with RMarkdown. However, once you've built your application or document, you'll need to share it with others. In this topic, we'll cover the various ways to deploy Shiny apps and RMarkdown documents, making them accessible to a wider audience. **Deploying Shiny Apps** Shiny provides several options for deploying your apps, including: 1. **Shiny Server**: A free, open-source server that allows you to host your Shiny apps on your own server. You can download the Shiny Server from the RStudio website: <https://www.rstudio.com/products/shiny/shiny-server/> 2. **RStudio Connect**: A platform that allows you to host and manage your Shiny apps, as well as RMarkdown documents and other content. You can find more information on RStudio Connect here: <https://www.rstudio.com/products/connect/> 3. **Shiny Apps.io**: A cloud-based platform that allows you to deploy your Shiny apps with a single click. You can find more information on Shiny Apps.io here: <https://www.shinyapps.io/> 4. **Docker**: A containerization platform that allows you to package your Shiny app and its dependencies into a single container. You can find more information on Docker here: <https://www.docker.com/> To deploy your Shiny app, you'll need to follow these general steps: 1. **Create a new directory for your app**: This will contain your app's code, data, and any other dependencies. 2. **Create a `app.R` file**: This file will contain the code for your Shiny app. 3. **Create a `ui.R` file**: This file will contain the user interface code for your Shiny app. 4. **Create a `server.R` file**: This file will contain the server-side code for your Shiny app. 5. **Configure your deployment options**: Depending on the deployment method you choose, you'll need to configure the necessary options, such as setting up a Shiny Server or creating a Docker container. **Deploying RMarkdown Documents** RMarkdown documents can be deployed in various ways, including: 1. **RPubs**: A free, web-based platform that allows you to host and share your RMarkdown documents. You can find more information on RPubs here: <https://rpubs.com/> 2. **GitHub Pages**: A web-based platform that allows you to host and share your RMarkdown documents using GitHub. You can find more information on GitHub Pages here: <https://pages.github.com/> 3. **RStudio Connect**: A platform that allows you to host and manage your RMarkdown documents, as well as Shiny apps and other content. You can find more information on RStudio Connect here: <https://www.rstudio.com/products/connect/> To deploy your RMarkdown document, you'll need to follow these general steps: 1. **Create a new directory for your document**: This will contain your document's code and data. 2. **Create a new RMarkdown file**: This file will contain the code for your document. 3. **Knit your document**: Use the `knit` function in R to create a PDF or HTML version of your document. 4. **Configure your deployment options**: Depending on the deployment method you choose, you'll need to configure the necessary options, such as setting up an RPubs account or creating a GitHub Pages repository. **Best Practices for Deployment** When deploying your Shiny app or RMarkdown document, it's essential to follow best practices to ensure a smooth and reliable deployment process. Here are some tips to keep in mind: * **Test your app or document thoroughly**: Before deploying, test your app or document to ensure that it works as expected and that there are no issues. * **Use a version control system**: Use a version control system like Git to track changes to your app or document and to collaborate with others. * **Document your app or document**: Document your app or document to make it easier for others to understand how to use it. * **Monitor your app or document**: Monitor your app or document to ensure that it is working correctly and to identify any issues that may arise. **Conclusion** Deploying Shiny apps and RMarkdown documents is an essential step in sharing your work with others. By following the steps outlined in this topic, you can deploy your apps and documents in a variety of ways, including using Shiny Server, RStudio Connect, Shiny Apps.io, Docker, RPubs, GitHub Pages, and RStudio Connect. Remember to follow best practices for deployment, such as testing your app or document thoroughly, using a version control system, documenting your app or document, and monitoring your app or document. **What's Next?** In the next topic, we'll explore the `caret` and `mlr3` packages and learn how to implement machine learning algorithms in R. We'll cover topics such as data preparation, model selection, and model evaluation. **Practice Exercise** Deploy your own Shiny app or RMarkdown document using one of the methods outlined in this topic. Share your deployment experience and any challenges you faced in the comments section below.

Images

Mastering R Programming: Data Analysis, Visualization, and Beyond

Course

Objectives

  • Develop a solid understanding of R programming fundamentals.
  • Master data manipulation and statistical analysis using R.
  • Learn to create professional visualizations and reports using R's powerful packages.
  • Gain proficiency in using R for real-world data science, machine learning, and automation tasks.
  • Understand best practices for writing clean, efficient, and reusable R code.

Introduction to R and Environment Setup

  • Overview of R: History, popularity, and use cases in data analysis.
  • Setting up the R environment: Installing R and RStudio.
  • Introduction to RStudio interface and basic usage.
  • Basic syntax of R: Variables, data types, and basic arithmetic operations.
  • Lab: Install R and RStudio, and write a simple script performing basic mathematical operations.

Data Types and Structures in R

  • Understanding R’s data types: Numeric, character, logical, and factor.
  • Introduction to data structures: Vectors, lists, matrices, arrays, and data frames.
  • Subsetting and indexing data in R.
  • Introduction to R’s built-in functions and how to use them.
  • Lab: Create and manipulate vectors, matrices, and data frames to solve data-related tasks.

Control Structures and Functions in R

  • Using control flow in R: if-else, for loops, while loops, and apply functions.
  • Writing custom functions in R: Arguments, return values, and scope.
  • Anonymous functions and lambda functions in R.
  • Best practices for writing reusable functions.
  • Lab: Write programs using loops and control structures, and create custom functions to automate repetitive tasks.

Data Import and Export in R

  • Reading and writing data in R: CSV, Excel, and text files.
  • Using `readr` and `readxl` for efficient data import.
  • Introduction to working with databases in R using `DBI` and `RSQLite`.
  • Handling missing data and data cleaning techniques.
  • Lab: Import data from CSV and Excel files, perform basic data cleaning, and export the cleaned data.

Data Manipulation with dplyr and tidyr

  • Introduction to the `dplyr` package for data manipulation.
  • Key `dplyr` verbs: `filter()`, `select()`, `mutate()`, `summarize()`, and `group_by()`.
  • Data reshaping with `tidyr`: Pivoting and unpivoting data using `gather()` and `spread()`.
  • Combining datasets using joins in `dplyr`.
  • Lab: Perform complex data manipulation tasks using `dplyr` and reshape data using `tidyr`.

Statistical Analysis in R

  • Descriptive statistics: Mean, median, mode, variance, and standard deviation.
  • Performing hypothesis testing: t-tests, chi-square tests, and ANOVA.
  • Introduction to correlation and regression analysis.
  • Using R for probability distributions: Normal, binomial, and Poisson distributions.
  • Lab: Perform statistical analysis on a dataset, including hypothesis testing and regression analysis.

Data Visualization with ggplot2

  • Introduction to the grammar of graphics and the `ggplot2` package.
  • Creating basic plots: Scatter plots, bar charts, line charts, and histograms.
  • Customizing plots: Titles, labels, legends, and themes.
  • Creating advanced visualizations: Faceting, adding annotations, and custom scales.
  • Lab: Use `ggplot2` to create and customize a variety of visualizations, including scatter plots and bar charts.

Advanced Data Visualization Techniques

  • Creating interactive visualizations with `plotly` and `ggplotly`.
  • Time series data visualization in R.
  • Using `leaflet` for creating interactive maps.
  • Best practices for designing effective visualizations for reports and presentations.
  • Lab: Develop interactive visualizations and build a dashboard using `plotly` or `shiny`.

Working with Dates and Times in R

  • Introduction to date and time classes: `Date`, `POSIXct`, and `POSIXlt`.
  • Performing arithmetic operations with dates and times.
  • Using the `lubridate` package for easier date manipulation.
  • Working with time series data in R.
  • Lab: Manipulate and analyze time series data, and perform operations on dates using `lubridate`.

Functional Programming in R

  • Introduction to functional programming concepts in R.
  • Using higher-order functions: `apply()`, `lapply()`, `sapply()`, and `map()`.
  • Working with pure functions and closures.
  • Advanced functional programming with the `purrr` package.
  • Lab: Solve data manipulation tasks using `apply` family functions and explore the `purrr` package for advanced use cases.

Building Reports and Dashboards with RMarkdown and Shiny

  • Introduction to RMarkdown for reproducible reports.
  • Integrating R code and outputs in documents.
  • Introduction to `Shiny` for building interactive dashboards.
  • Deploying Shiny apps and RMarkdown documents.
  • Lab: Create a reproducible report using RMarkdown and build a basic dashboard with `Shiny`.

Introduction to Machine Learning with R

  • Overview of machine learning in R using the `caret` and `mlr3` packages.
  • Supervised learning: Linear regression, decision trees, and random forests.
  • Unsupervised learning: K-means clustering, PCA.
  • Model evaluation techniques: Cross-validation and performance metrics.
  • Lab: Implement a simple machine learning model using `caret` or `mlr3` and evaluate its performance.

Big Data and Parallel Computing in R

  • Introduction to handling large datasets in R using `data.table` and `dplyr`.
  • Working with databases and SQL queries in R.
  • Parallel computing in R: Using `parallel` and `foreach` packages.
  • Introduction to distributed computing with `sparklyr` and Apache Spark.
  • Lab: Perform data analysis on large datasets using `data.table`, and implement parallel processing using `foreach`.

Debugging, Testing, and Profiling R Code

  • Debugging techniques in R: Using `browser()`, `traceback()`, and `debug()`.
  • Unit testing in R using `testthat`.
  • Profiling code performance with `Rprof` and `microbenchmark`.
  • Writing efficient R code and avoiding common performance pitfalls.
  • Lab: Write unit tests for R functions using `testthat`, and profile code performance to optimize efficiency.

Version Control and Project Management in R

  • Introduction to project organization in R using `renv` and `usethis`.
  • Using Git for version control in RStudio.
  • Managing R dependencies with `packrat` and `renv`.
  • Best practices for collaborative development and sharing R projects.
  • Lab: Set up version control for an R project using Git, and manage dependencies with `renv`.

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