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Khamisi Kibet

Khamisi Kibet

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7 Months ago | 50 views

**Course Title:** MATLAB Programming: Applications in Engineering, Data Science, and Simulation **Section Title:** Machine Learning with MATLAB **Topic:** Evaluating machine learning models and performance metrics. **Introduction** Machine learning model evaluation is a critical step in the model development process. It helps you to assess the performance of your model, identify potential issues, and compare different models. In this topic, we will cover the key concepts, techniques, and metrics used to evaluate machine learning models in MATLAB. **Keys to model evaluation** Model evaluation involves assessing how well a model performs on unseen data. The key to model evaluation is to use a hold-out dataset, also known as a test set, which is not used during the training process. This helps to ensure that the model is not overfitting to the training data and can generalize well to new, unseen data. **Model performance metrics** Common model performance metrics used in machine learning include: * **Accuracy**: The proportion of correctly classified instances out of all instances in the test set. * **Precision**: The proportion of true positives (correctly classified instances) out of all positive predictions made by the model. * **Recall**: The proportion of true positives out of all actual positive instances in the test set. * **F1-score**: The harmonic mean of precision and recall. * **Mean Squared Error (MSE)**: The average squared difference between predicted and actual values. * **Mean Absolute Error (MAE)**: The average absolute difference between predicted and actual values. * **Coefficient of Determination (R-squared)**: Measures the proportion of the variance in the dependent variable that is predictable from the independent variable. In MATLAB, you can use the `confusionmat()` function to calculate accuracy, precision, recall, and F1-score for classification models, and the `mse()` or `mae()` functions to calculate mean squared error and mean absolute error for regression models. ```matlab % Accuracy, precision, recall, and F1-score [cm, acc, precision, recall, f1score] = confusionmat(labels, predictions); % Mean Squared Error (MSE) mse = mse(predictions, actual_values); % Mean Absolute Error (MAE) mae = mae(predictions, actual_values); ``` **Visualizing model performance** Visualizing model performance can help to identify potential issues and compare different models. Common plots used to visualize model performance include: * **Confusion matrix**: Shows the number of true positives, false positives, true negatives, and false negatives. * **ROC curve**: Plots the true positive rate against the false positive rate at different thresholds. * **Precision-recall curve**: Plots precision against recall at different thresholds. In MATLAB, you can use the `plotconfusion()` function to create a confusion matrix plot and the `plotroc()` function to create an ROC curve plot. ```matlab % Confusion matrix plot plotconfusion(labels, predictions); % ROC curve plot [X,Y,T,AUC] = perfcurve(labels, predictions, 'Class 1'); plot(X,Y); xlabel('False Positive Rate'); ylabel('True Positive Rate'); ``` **Cross-validation** Cross-validation is a technique used to evaluate model performance on unseen data while using all the available data for training and testing. Common types of cross-validation include: * **K-fold cross-validation**: Divides the data into k subsets and uses each subset as a test set in turn. * **Leave-one-out cross-validation**: Treats each instance as a test set in turn and trains the model on the remaining instances. In MATLAB, you can use the `crossval()` function to perform k-fold cross-validation. ```matlab % K-fold cross-validation k = 5; % number of folds [idx, sets] = crossval(k, labels); model_loss = zeros(size(labels, 1),1); for i = 1:k % Train and test the model using the current fold train_idx = sets ~= i; test_idx = sets == i; train_model = fitcsvm(X(train_idx, :), labels(train_idx), 'KernelFunction', 'polynomial'); predictions = predict(train_model, X(test_idx, :)); model_loss = merge(loss, idx, i); end ``` **Model selection** Model selection involves choosing the best model from a set of candidate models. Common techniques used for model selection include: * **Grid search**: Trains multiple models with different combinations of hyperparameters and evaluates their performance. * **Random search**: Trains multiple models with different combinations of hyperparameters chosen randomly and evaluates their performance. In MATLAB, you can use the `train()` function to perform grid search and random search. ```matlab % Grid search n = [1 2 3 4]; % Grid size for hyperparameter tuning rng('default'); % Set random seed opts = defaultOptions(X, y, 'optimization'); param_grid = createParamGrid(opts, 'Size', n); [best_idx, ~] = findBestParams(param_grid, labels, X, Y); % Random search num_search = 20; % Number of searches search_opts = optimoptions('fminsearch', ... 'MaxIter', num_search, 'PopInitRange', 0.001, ... 'StepTolerance', 1.0e-10); [rand_idx, ~] = fminsearch(@randFun, bounds, search_opts); ``` **Conclusion** Evaluating machine learning models and performance metrics is a critical step in the model development process. By using hold-out datasets, common model performance metrics, and visualizing model performance, you can identify potential issues and compare different models. Cross-validation and model selection are also important techniques used in model evaluation. With MATLAB, you can easily evaluate machine learning models using its built-in functions and techniques. **Recommended Reading** * [Model Evaluation in Machine Learning](https://www.mathworks.com/discovery/model-evaluation.html) by MathWorks * [Evaluation Metrics for Machine Learning Models](https://scikit-learn.org/stable/modules/model_evaluation.html) by scikit-learn * [K-Fold Cross-Validation in Machine Learning](https://www.section.io/engineering-education/k-fold-cross-validation/) by Section **Now that you have learned about evaluating machine learning models and performance metrics in MATLAB, we encourage you to try out the different techniques and functions discussed in this topic. Practice with your own datasets and models to gain hands-on experience. Upon completing this module, you may have questions or need further clarification on specific concepts. Please feel free to ask for help in the comments below.**
Course

Evaluating Machine Learning Models in MATLAB.

**Course Title:** MATLAB Programming: Applications in Engineering, Data Science, and Simulation **Section Title:** Machine Learning with MATLAB **Topic:** Evaluating machine learning models and performance metrics. **Introduction** Machine learning model evaluation is a critical step in the model development process. It helps you to assess the performance of your model, identify potential issues, and compare different models. In this topic, we will cover the key concepts, techniques, and metrics used to evaluate machine learning models in MATLAB. **Keys to model evaluation** Model evaluation involves assessing how well a model performs on unseen data. The key to model evaluation is to use a hold-out dataset, also known as a test set, which is not used during the training process. This helps to ensure that the model is not overfitting to the training data and can generalize well to new, unseen data. **Model performance metrics** Common model performance metrics used in machine learning include: * **Accuracy**: The proportion of correctly classified instances out of all instances in the test set. * **Precision**: The proportion of true positives (correctly classified instances) out of all positive predictions made by the model. * **Recall**: The proportion of true positives out of all actual positive instances in the test set. * **F1-score**: The harmonic mean of precision and recall. * **Mean Squared Error (MSE)**: The average squared difference between predicted and actual values. * **Mean Absolute Error (MAE)**: The average absolute difference between predicted and actual values. * **Coefficient of Determination (R-squared)**: Measures the proportion of the variance in the dependent variable that is predictable from the independent variable. In MATLAB, you can use the `confusionmat()` function to calculate accuracy, precision, recall, and F1-score for classification models, and the `mse()` or `mae()` functions to calculate mean squared error and mean absolute error for regression models. ```matlab % Accuracy, precision, recall, and F1-score [cm, acc, precision, recall, f1score] = confusionmat(labels, predictions); % Mean Squared Error (MSE) mse = mse(predictions, actual_values); % Mean Absolute Error (MAE) mae = mae(predictions, actual_values); ``` **Visualizing model performance** Visualizing model performance can help to identify potential issues and compare different models. Common plots used to visualize model performance include: * **Confusion matrix**: Shows the number of true positives, false positives, true negatives, and false negatives. * **ROC curve**: Plots the true positive rate against the false positive rate at different thresholds. * **Precision-recall curve**: Plots precision against recall at different thresholds. In MATLAB, you can use the `plotconfusion()` function to create a confusion matrix plot and the `plotroc()` function to create an ROC curve plot. ```matlab % Confusion matrix plot plotconfusion(labels, predictions); % ROC curve plot [X,Y,T,AUC] = perfcurve(labels, predictions, 'Class 1'); plot(X,Y); xlabel('False Positive Rate'); ylabel('True Positive Rate'); ``` **Cross-validation** Cross-validation is a technique used to evaluate model performance on unseen data while using all the available data for training and testing. Common types of cross-validation include: * **K-fold cross-validation**: Divides the data into k subsets and uses each subset as a test set in turn. * **Leave-one-out cross-validation**: Treats each instance as a test set in turn and trains the model on the remaining instances. In MATLAB, you can use the `crossval()` function to perform k-fold cross-validation. ```matlab % K-fold cross-validation k = 5; % number of folds [idx, sets] = crossval(k, labels); model_loss = zeros(size(labels, 1),1); for i = 1:k % Train and test the model using the current fold train_idx = sets ~= i; test_idx = sets == i; train_model = fitcsvm(X(train_idx, :), labels(train_idx), 'KernelFunction', 'polynomial'); predictions = predict(train_model, X(test_idx, :)); model_loss = merge(loss, idx, i); end ``` **Model selection** Model selection involves choosing the best model from a set of candidate models. Common techniques used for model selection include: * **Grid search**: Trains multiple models with different combinations of hyperparameters and evaluates their performance. * **Random search**: Trains multiple models with different combinations of hyperparameters chosen randomly and evaluates their performance. In MATLAB, you can use the `train()` function to perform grid search and random search. ```matlab % Grid search n = [1 2 3 4]; % Grid size for hyperparameter tuning rng('default'); % Set random seed opts = defaultOptions(X, y, 'optimization'); param_grid = createParamGrid(opts, 'Size', n); [best_idx, ~] = findBestParams(param_grid, labels, X, Y); % Random search num_search = 20; % Number of searches search_opts = optimoptions('fminsearch', ... 'MaxIter', num_search, 'PopInitRange', 0.001, ... 'StepTolerance', 1.0e-10); [rand_idx, ~] = fminsearch(@randFun, bounds, search_opts); ``` **Conclusion** Evaluating machine learning models and performance metrics is a critical step in the model development process. By using hold-out datasets, common model performance metrics, and visualizing model performance, you can identify potential issues and compare different models. Cross-validation and model selection are also important techniques used in model evaluation. With MATLAB, you can easily evaluate machine learning models using its built-in functions and techniques. **Recommended Reading** * [Model Evaluation in Machine Learning](https://www.mathworks.com/discovery/model-evaluation.html) by MathWorks * [Evaluation Metrics for Machine Learning Models](https://scikit-learn.org/stable/modules/model_evaluation.html) by scikit-learn * [K-Fold Cross-Validation in Machine Learning](https://www.section.io/engineering-education/k-fold-cross-validation/) by Section **Now that you have learned about evaluating machine learning models and performance metrics in MATLAB, we encourage you to try out the different techniques and functions discussed in this topic. Practice with your own datasets and models to gain hands-on experience. Upon completing this module, you may have questions or need further clarification on specific concepts. Please feel free to ask for help in the comments below.**

Images

MATLAB Programming: Applications in Engineering, Data Science, and Simulation

Course

Objectives

  • Gain a solid understanding of MATLAB's syntax and programming environment.
  • Learn how to perform mathematical computations and visualizations using MATLAB.
  • Develop skills in working with data, matrices, and arrays in MATLAB.
  • Master the creation of custom functions, scripts, and simulations in MATLAB.
  • Apply MATLAB to solve real-world problems in engineering, data analysis, and scientific research.

Introduction to MATLAB and Environment Setup

  • Overview of MATLAB: History, applications, and use cases in academia and industry.
  • Understanding the MATLAB interface: Command window, editor, workspace, and file structure.
  • Basic MATLAB syntax: Variables, data types, operators, and arrays.
  • Running scripts and creating basic MATLAB programs.
  • Lab: Set up MATLAB, explore the interface, and write a basic script that performs mathematical calculations.

Working with Arrays and Matrices

  • Introduction to arrays and matrices: Creation, indexing, and manipulation.
  • Matrix operations: Addition, subtraction, multiplication, and division.
  • Element-wise operations and the use of built-in matrix functions.
  • Reshaping and transposing matrices.
  • Lab: Create and manipulate arrays and matrices to solve a set of mathematical problems.

MATLAB Control Structures

  • Conditional statements: if-else, switch-case.
  • Looping structures: for, while, and nested loops.
  • Break and continue statements.
  • Best practices for writing clean and efficient control structures.
  • Lab: Write programs that use control structures to solve practical problems involving decision-making and repetition.

Functions and Scripts in MATLAB

  • Understanding MATLAB scripts and functions: Definitions and differences.
  • Creating and calling custom functions.
  • Function input/output arguments and variable scope.
  • Using anonymous and nested functions in MATLAB.
  • Lab: Write custom functions to modularize code, and use scripts to automate workflows.

Plotting and Data Visualization

  • Introduction to 2D plotting: Line plots, scatter plots, bar graphs, and histograms.
  • Customizing plots: Titles, labels, legends, and annotations.
  • Working with multiple plots and subplots.
  • Introduction to 3D plotting: Mesh, surface, and contour plots.
  • Lab: Create visualizations for a given dataset using different types of 2D and 3D plots.

Working with Data: Importing, Exporting, and Manipulating

  • Reading and writing data to/from files (text, CSV, Excel).
  • Working with tables and time series data in MATLAB.
  • Data preprocessing: Sorting, filtering, and handling missing values.
  • Introduction to MATLAB's `datastore` for large data sets.
  • Lab: Import data from external files, process it, and export the results to a different format.

Numerical Computation and Linear Algebra

  • Solving linear systems of equations using matrix methods.
  • Eigenvalues, eigenvectors, and singular value decomposition (SVD).
  • Numerical integration and differentiation.
  • Root-finding methods: Bisection, Newton's method, etc.
  • Lab: Solve real-world problems involving linear systems and numerical methods using MATLAB.

Polynomials, Curve Fitting, and Interpolation

  • Working with polynomials in MATLAB: Roots, derivatives, and integrals.
  • Curve fitting using polyfit and interpolation techniques (linear, spline, etc.).
  • Least squares fitting for data analysis.
  • Visualization of fitted curves and interpolated data.
  • Lab: Fit curves and interpolate data points to model relationships within a dataset.

Simulink and System Modeling

  • Introduction to Simulink for system modeling and simulation.
  • Building block diagrams for dynamic systems.
  • Simulating continuous-time and discrete-time systems.
  • Introduction to control system modeling with Simulink.
  • Lab: Design and simulate a dynamic system using Simulink, and analyze the results.

Solving Differential Equations with MATLAB

  • Introduction to differential equations and MATLAB's ODE solvers.
  • Solving ordinary differential equations (ODEs) using `ode45`, `ode23`, etc.
  • Systems of ODEs and initial value problems (IVPs).
  • Visualizing solutions of differential equations.
  • Lab: Solve a set of ODEs and visualize the results using MATLAB's built-in solvers.

Optimization and Nonlinear Systems

  • Introduction to optimization in MATLAB: `fminsearch`, `fmincon`, etc.
  • Solving unconstrained and constrained optimization problems.
  • Multi-variable and multi-objective optimization.
  • Applications of optimization in engineering and data science.
  • Lab: Solve real-world optimization problems using MATLAB's optimization toolbox.

Image Processing and Signal Processing

  • Introduction to digital image processing with MATLAB.
  • Working with image data: Reading, displaying, and manipulating images.
  • Basic signal processing: Fourier transforms, filtering, and spectral analysis.
  • Visualizing and interpreting image and signal processing results.
  • Lab: Process and analyze image and signal data using MATLAB's built-in functions.

Parallel Computing and Performance Optimization

  • Introduction to parallel computing in MATLAB.
  • Using `parfor`, `spmd`, and distributed arrays for parallel computations.
  • Improving MATLAB code performance: Vectorization and preallocation.
  • Profiling and debugging MATLAB code for performance issues.
  • Lab: Speed up a computationally intensive problem using parallel computing techniques in MATLAB.

Application Development with MATLAB

  • Introduction to MATLAB GUI development using App Designer.
  • Building interactive applications with buttons, sliders, and plots.
  • Event-driven programming and callback functions.
  • Packaging and deploying standalone MATLAB applications.
  • Lab: Develop a simple interactive GUI application using MATLAB's App Designer.

Machine Learning with MATLAB

  • Introduction to machine learning and MATLAB's Machine Learning Toolbox.
  • Supervised learning: Classification and regression.
  • Unsupervised learning: Clustering and dimensionality reduction.
  • Evaluating machine learning models and performance metrics.
  • Lab: Implement a machine learning model using MATLAB to analyze a dataset and make predictions.

Packaging, Deployment, and Version Control

  • Version control for MATLAB projects using Git.
  • MATLAB code packaging: Creating functions, toolboxes, and standalone applications.
  • Deploying MATLAB code to cloud platforms or integrating with other software.
  • Best practices for managing MATLAB projects and collaboration.
  • Lab: Package a MATLAB project and deploy it as a standalone application or share it as a toolbox.

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